Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908986.1_cds_XP_016459230.1_52776
CDS Infomation

[gene=LOC107782809] [db_xref=GeneID:107782809] [protein=beta-glucosidase BoGH3B-like] [protein_id=XP_016459230.1] [location=join(2460..2673,3455..3659,3999..4089,4170..4315,4632..4875,5714..5818,5905..6087,6178..6382,7080..7561)] [gbkey=CDS]
Sequence

ATGGAGAGATTTTTAATTATGGGATTTATGCTATTTTCCCTCTTGGCTGTTGTTACAGAG
GCAGAACACATGAAATATAAGGATCCAAAACAGAAATTAGGTGTTAGAATTAAAGATTTG
ATGAAAAGAATGACACTTGAGGAGAAAATTGGTCAGATGACTCAAATTGAGAGGAAAGTT
GCCTCAGCTGATGTTATGAGGAAATATTTCATTGGGAGCTTATTGAGTGGTGGAGGGAGT
GTACCAAAACCTAATGCCTCCGCGGAGGATTGGGTGAATATGGTAAATGAGTTTCAAAAG
GGCGCTCTTAAGACTCGCCTTGGCATTCCCATGATTTATGGCATTGATGCAGTTCATGGC
CATAATAATGTCTACAAAGCTACAATCTTCCCTCACAATGTTGGACTTGGTGTCACCAGG
GATCCTGATCTTGTGAAGCGAATCGGGGCTGCAACTGCACTTGAAGTCAGAGCCACAGGA
ATACAATATGCTTTTTCTCCCTGCCTTGCAGTATGTAGAAACCCGAGATGGGGCCGCTGT
TATGAAAGCTACAGTGAAGACGTTAATATCGTGCGAAGCATGACAGAGATCATTCCTGGT
TTACAAGGAGATGTGCCGGCTAACATGAGCAAGGGTGTTCCCTTTGTTGATGGAAAGAAA
AAGGTTGTGGCCTGTGCTAAGCACTTTGTGGCAGATGGTGGCACGGTCAATGGAATCGAT
GAAAATAATACAGTAATCGACCCGCAAGGATTATTTAGCATTCACATGCCAGCATATTAT
GATTCTGTCATAAAGGGTGTCGCGACAGTAATGGCATCTTACTCGAGCTTGAACGGCGAA
AGGATGCATGCCAACACACATCTACTCACTGGCTTCCTAAAAGAGAGGCTGAACTTCAGG
GGCTTTGTCATTTCAGATTGGGAAGGTATTAACCGGATTACTAACCCAGCTAACTCTAAC
TACACGTATTCCGTTCAAGCAAGTGTTATGGCAGGAGTTGACATGGTTATGGTACCAGAG
AACTATACAGATTTTATCGGCAACTTGACTTTCCTAGTGAAAAACAATTTCGTTCCCATG
AGCAGAATCGATGATGCAGTGAAGAGGATATTAAGGGTTAAGTTTGTCATGGGACTGTTT
GAGGATCCAATGGCTGATCTTAGCATGGCAAAATATTTGGGTTGCAAGGAGCATAGAGAA
TTGGCAAGGGAAGCAGTGAGGAAATCACTTGTGCTTTTGAAGAACGGAAAAAAACCTGAT
CAACCATTACTTCCCCTTCCGAAGAAAGCGCGAAGGATACTTGTTGCCGGAACTCATGCA
GATAATTTAGGATATCAGTGTGGAGGCTGGACAATTCAATGGCAGGGTGTTCCCGGCAAT
AATCTTACAATCGGAACTACCATCTCAAAGGCTATTATGAATACTGTTGATCCTTCAACA
GAAGTAGTATACCAGCAGAATCCTGTCTTAGTCGAGTCCAGCCAATTCGACTATGCTATC
GTAGTTGTTGGCGAACCTCCATATGCTGAAATGTATGGTGATAGCTCAAATCTCACTATA
CTTGATCCTGGTCCTAGCATTATCAAAAACATCTGTGGCACTGTCAAGTGTGTTGTAGTC
GTTATCTCTGGCCGTCCTGTTGTGATCGAACCATACGTTGAAAAAATGGACGCGCTCGTG
GCTGCATGGCTTCCAGGGACAGAAGGACAAGGTGTTGCTGATGTTTTGTTTGGTGACTAT
GGATTCACCGGAAAACTCGCGCGTACTTGGTTCAAGAGAGTCGATCAGCTTCCGATGAAC
GTTGGCGATCCACACTATGATCCTCTGTTCCCCTTTGGATTTGGCCTCACAACTCAGCCA
GTGAAGGGAAATTAA

Peptide Sequence

PEP ID

XP_016459230.1
PEP Infomation

PREDICTED: beta-glucosidase BoGH3B-like [Nicotiana tabacum]
Sequence

MERFLIMGFMLFSLLAVVTEAEHMKYKDPKQKLGVRIKDLMKRMTLEEKIGQMTQIERKV
ASADVMRKYFIGSLLSGGGSVPKPNASAEDWVNMVNEFQKGALKTRLGIPMIYGIDAVHG
HNNVYKATIFPHNVGLGVTRDPDLVKRIGAATALEVRATGIQYAFSPCLAVCRNPRWGRC
YESYSEDVNIVRSMTEIIPGLQGDVPANMSKGVPFVDGKKKVVACAKHFVADGGTVNGID
ENNTVIDPQGLFSIHMPAYYDSVIKGVATVMASYSSLNGERMHANTHLLTGFLKERLNFR
GFVISDWEGINRITNPANSNYTYSVQASVMAGVDMVMVPENYTDFIGNLTFLVKNNFVPM
SRIDDAVKRILRVKFVMGLFEDPMADLSMAKYLGCKEHRELAREAVRKSLVLLKNGKKPD
QPLLPLPKKARRILVAGTHADNLGYQCGGWTIQWQGVPGNNLTIGTTISKAIMNTVDPST
EVVYQQNPVLVESSQFDYAIVVVGEPPYAEMYGDSSNLTILDPGPSIIKNICGTVKCVVV
VISGRPVVIEPYVEKMDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKRVDQLPMN
VGDPHYDPLFPFGFGLTTQPVKGN

Transcript Sequence

Gene sequence data has not been registered.